Microbiology terms - O


obligate
An adjective referring to an environmental factor (for example, oxygen) which is always required for growth. For example, obligate aerobe. Compare with facultative.
obligate aerobe
An organism which can grow only in the presence of oxygen (O2).
oligonucleotide
A short nucleic acid molecule, either obtained from an organism or synthesized chemically.
oligotrophic
Describing a body of water in which nutrients are in low supply.
oncogene
A gene whose expression causes formation of a tumor.
open reading frame (ORF)
The entire length of a DNA molecule that starts with a start codon and ends with a stop codon.
operator
A specific region of the DNA at the initial end of a gene, where the repressor protein binds and blocks mRNA synthesis.
operon
A cluster of genes whose expression is controlled by a single operator. Typical of prokaryotic cells.
opsonization
Promotion of phagocytosis by a specific antibody in combination with complement.
organelle
A membrane-enclosed body specialized for carrying out certain functions; found only in eukaryotic cells.
organotroph
In reference to energy source (electron donor) - An organism which obtains energy by the metabolism of organic substrates (as electron donors). There are two type of organotrophs: chemoorganotroph and photoorganotroph. Compare with autotroph, lithotroph, heterotroph, phototroph.
osmosis
Diffusion of water through a membrane from a region of low solute concentration to one of higher concentration.
outbreak
The occurrence of a large number of cases of a disease in a short period of time.
oxic
Containing oxygen; aerobic. Usually used in reference to a microbial habitat.
oxidation
A process by which a compound gives up electrons, acting as an electron donor, and becomes oxidized.
oxidation-reduction (redox) reaction
A coupled pair of reactions, in which one compound becomes oxidized, while another becomes reduced and takes up the electrons released in the oxidation reaction.
oxidative phosphorylation
The non-phototrophic production of ATP at the expense of a proton motive force (PMF) formed by electron transport. Also electron-transport phosphyrylation.
oxygenic photosynthesis
Use of light energy to synthesize ATP and NADPH by noncyclic photophosphorylation with the production of oxygen from water.

Compiled by Tsute Chen, Converted by Ben Hoyt